Copy-Number Analysis of Large Microarray Data Sets

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Documentation for package ‘aroma.cn’ version 1.7.1

• DESCRIPTION file.
• Package NEWS.

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aroma.cn-package	Package aroma.cn
AbstractCurveNormalization	The AbstractCurveNormalization class
aroma.cn	Package aroma.cn
callXXorXY	Calls XX or XY from ChrX allele B fractions of a normal sample
callXXorXY.numeric	Calls XX or XY from ChrX allele B fractions of a normal sample
MultiSourceCopyNumberNormalization	The MultiSourceCopyNumberNormalization class
PairedPscbsModel	The PairedPscbsModel class
PrincipalCurveNormalization	The PrincipalCurveNormalization class
TotalCnBinnedSmoothing	The TotalCnBinnedSmoothing class
TotalCnKernelSmoothing	The TotalCnKernelSmoothing class
TotalCnSmoothing	The abstract TotalCnSmoothing class
TumorBoostNormalization	The TumorBoostNormalization class
XYCurveNormalization	The XYCurveNormalization class