BaseAverageQualityPlot
                        BaseAverageQualityPlot
BaseAverageQualityPlotly
                        interactive BaseAverageQualityPlot
BaseCompositionAreaChartPlot
                        BaseCompositionAreaChartPlot
BaseCompositionLinePlot
                        BaseCompositionLinePlot
BaseQualityBoxplotPlot
                        BaseQualityBoxplotPlot
BulkAlignment           Bulk alignment function
CombinedAlignment       Combined alignment for dual RNA-seq
CorrPlotHeatmap         CorrPlotHeatmap
CorrPlotHeatmaply       CorrPlotHeatmaply
DEGsServerLogic         Server function for DEGs module in Shiny
                        application
DEGsUserInterface       UI function for DEGs module in Shiny
                        application
EDAServerLogic          Server function for EDA module in Shiny
                        application
EDAUserInterface        UI function for EDA module in Shiny application
EdgerDEG                EdgerDEG
Filtering               Filtering
FilteringServerLogic    Server function for filtering module in Shiny
                        application
FilteringUserInterface
                        UI function for filtering module in Shiny
                        application
GCcontentDistributionPlot
                        GCcontentDistributionPlot
GCcontentDistributionPlotly
                        interactive GCcontentDistributionPlot
GetEdgerY               GetEdgerY
HeatmapExp              HeatmapExp
HeatmapExpPlotly        HeatmapExpPlotly
IndexingBulk            Bulk indexing
IndexingBulkServerLogic
                        Indexing bulk server logic
IndexingBulkUserInterface
                        Indexing bulk ui
IndexingComb            Combined indexing
IndexingCombinedServerLogic
                        Indexing combined server logic
IndexingCombinedUserInterface
                        Indexing combined ui
IndexingSequentialParallel
                        Indexing sequential parallel
IndexingSequentialProgressive
                        Indexing sequential progressive
IndexingSequentialServerLogic
                        Indexing sequential server logic
IndexingSequentialUserInterface
                        Indexing sequential ui
QualityCheckAnalysis    QUALITY CONTROL ANALYSIS
Saturation              Saturation
SequenceLengthDistributionPlot
                        SequenceLengthDistributionPlot
SequenceLengthDistributionPlotly
                        interactive SequenceLengthDistributionPlot
SequentialAlignment     Sequential alignment function
Summarization           Summarization
SummarizationServerLogic
                        Server function for Summarization module in
                        Shiny application
SummarizationUserInterface
                        UI function for Summarization module in Shiny
                        application
UpSetPlot               UpSetPlot
UpsetjsPlot             UpsetjsPlot
WorkflowServerLogic     Server function for workflow module in Shiny
                        application
WorkflowUserInterface   UI function for workflow module in Shiny
                        application
barplotExp              barplotExp
boxplotExp              boxplotExp
checkMetadata           checkMetadata
counting_Reads          COUNTING SEQUENCES
getDegMerged            getDegMerged
inDAGO                  inDAGO
mappingBulkServerLogic
                        Mapping bulk server logic
mappingBulkUserInterface
                        Mapping bulk ui
mappingCombinedServerLogic
                        Mapping combined server logic
mappingCombinedUserInterface
                        Mapping combined ui
mappingSequentialServerLogic
                        Mapping sequential server logic
mappingSequentialUserInterface
                        Mapping sequential ui
mdsPlot                 mdsPlot
mdsPlottly              mdsPlottly
mdsinfo                 mdsinfo
pcaPlot                 pcaPlot
pcaPlottly              pcaPlottly
pcainfo                 pcainfo
qualityControlServerLogic
                        Quality control server logic
qualityControlUserInterface
                        Quality control ui
volcanoPlot             volcanoPlot
volcanoPlottly          volcanoPlottly
