Last updated on 2025-01-19 05:49:06 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 7.70 | 49.52 | 57.22 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 5.50 | 36.56 | 42.06 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 95.69 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 83.25 | OK | |||
| r-devel-windows-x86_64 | 0.1.0 | 10.00 | 67.00 | 77.00 | NOTE | |
| r-patched-linux-x86_64 | 0.1.0 | 13.87 | 45.44 | 59.31 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 6.14 | 45.59 | 51.73 | OK | |
| r-release-macos-arm64 | 0.1.0 | 31.00 | OK | |||
| r-release-macos-x86_64 | 0.1.0 | 42.00 | OK | |||
| r-release-windows-x86_64 | 0.1.0 | 8.00 | 0.00 | 8.00 | FAIL | |
| r-oldrel-macos-arm64 | 0.1.0 | 31.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.0 | 48.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.0 | 10.00 | 75.00 | 85.00 | OK |
Version: 0.1.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
bcalibrate.Rd: kEstimate, pca
cal_rv.Rd: kEstimate, pca
gcalibrate.Rd: kEstimate, pca
plot_estimates.Rd: theme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 0.1.0
Check: PDF version of manual
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
Fitting the latent confounder model by PPCA with default.
Observed outcome model fitted by simple linear regression with default.
Worst-case calibration executed.
> plot_estimates(est_g1)
> # with negative conotrls #
> est_g1_nc <- gcalibrate(y = y, tr = tr, t1 = t1, t2 = t2, nU = 3,
+ calitype = "worstcase", R2 = c(0.3, 1), nc_index = c(3, 6))
Fitting the latent confounder model by PPCA with default.
Observed outcome model fitted by simple linear regression with default.
Worst-case calibration with negative controls executed.
> plot_estimates(est_g1_nc)
>
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 3.03 0.38 3.41 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-release-windows-x86_64