Last updated on 2025-01-19 05:49:16 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.3 | 7.04 | 579.51 | 586.55 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.2.3 | 5.07 | 471.35 | 476.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2.3 | 945.67 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.3 | 1103.63 | OK | |||
| r-devel-windows-x86_64 | 1.2.3 | 8.00 | 436.00 | 444.00 | OK | |
| r-patched-linux-x86_64 | 1.2.3 | 7.84 | 644.31 | 652.15 | OK | |
| r-release-linux-x86_64 | 1.2.3 | 7.12 | 628.83 | 635.95 | OK | |
| r-release-macos-arm64 | 1.2.3 | 208.00 | OK | |||
| r-release-macos-x86_64 | 1.2.3 | 414.00 | OK | |||
| r-release-windows-x86_64 | 1.2.3 | 9.00 | 444.00 | 453.00 | OK | |
| r-oldrel-macos-arm64 | 1.2.3 | 216.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.2.3 | 425.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.2.3 | 10.00 | 590.00 | 600.00 | OK |
Version: 1.2.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘cohort-intersect.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/PatientProfiles.Rcheck/vign_test/PatientProfiles/vignettes/cohort-intersect_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16730 bytes
Input file size = 16832 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 14956
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 14956
Output IDAT size = 14956 bytes (1774 bytes decrease)
Output file size = 15034 bytes (1798 bytes = 10.68% decrease)
--- finished re-building ‘cohort-intersect.Rmd’
--- re-building ‘concept-intersect.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/PatientProfiles.Rcheck/vign_test/PatientProfiles/vignettes/concept-intersect_files/figure-html/unnamed-chunk-11-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24444 bytes
Input file size = 24546 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21757
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21757
Output IDAT size = 21757 bytes (2687 bytes decrease)
Output file size = 21835 bytes (2711 bytes = 11.04% decrease)
--- finished re-building ‘concept-intersect.Rmd’
--- re-building ‘demographics.rmd’ using rmarkdown
--- finished re-building ‘demographics.rmd’
--- re-building ‘summarise.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Quitting from lines 79-82 [unnamed-chunk-3] (summarise.Rmd)
Error: processing vignette 'summarise.Rmd' failed with diagnostics:
cannot open URL 'https://example-data.ohdsi.dev/GiBleed.zip'
--- failed re-building ‘summarise.Rmd’
--- re-building ‘table-intersect.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Quitting from lines 35-39 [unnamed-chunk-3] (table-intersect.Rmd)
Error: processing vignette 'table-intersect.Rmd' failed with diagnostics:
cannot open URL 'https://example-data.ohdsi.dev/GiBleed.zip'
--- failed re-building ‘table-intersect.Rmd’
SUMMARY: processing the following files failed:
‘summarise.Rmd’ ‘table-intersect.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang