CRAN Package Check Results for Package knockoff

Last updated on 2019-10-18 12:47:41 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.2 3.38 107.60 110.98 OK --no-vignettes
r-devel-linux-x86_64-debian-gcc 0.3.2 2.57 81.40 83.97 OK --no-vignettes
r-devel-linux-x86_64-fedora-clang 0.3.2 2281.06 OK
r-devel-linux-x86_64-fedora-gcc 0.3.2 2259.48 OK
r-devel-windows-ix86+x86_64 0.3.2 11.00 91.00 102.00 NOTE --no-vignettes
r-patched-linux-x86_64 0.3.2 2.88 103.64 106.52 OK --no-vignettes
r-patched-solaris-x86 0.3.2 3947.50 WARN
r-release-linux-x86_64 0.3.2 3.14 103.89 107.03 OK --no-vignettes
r-release-windows-ix86+x86_64 0.3.2 7.00 134.00 141.00 NOTE --no-vignettes
r-release-osx-x86_64 0.3.2 FAIL
r-oldrel-windows-ix86+x86_64 0.3.2 4.00 102.00 106.00 NOTE --no-vignettes
r-oldrel-osx-x86_64 0.3.2 WARN

Check Details

Version: 0.3.2
Flags: --no-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘advanced.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: Matrix
    Loading required package: foreach
    Loaded glmnet 2.0-18
    
    --- finished re-building ‘advanced.Rmd’
    
    --- re-building ‘fixed.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘fixed.Rmd’
    
    --- re-building ‘hiv.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘hiv.Rmd’
    
    Cpu Limit Exceeded - core dumped
    --- re-building ‘knockoff.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: Matrix
    Loading required package: foreach
    Loaded glmnet 2.0-18
    
    SUMMARY: processing the following file failed:
     ‘knockoff.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.3.2
Check: re-building of vignette outputs
Result: FAIL
    
Flavor: r-release-osx-x86_64

Version: 0.3.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: Matrix
    Loading required package: foreach
    Loaded glmnet 2.0-16
    
    Quitting from lines 40-47 (hiv.Rmd)
    Error: processing vignette 'hiv.Rmd' failed with diagnostics:
    cannot open the connection to 'http://hivdb.stanford.edu/pages/published_analysis/genophenoPNAS2006/DATA/PI_DATA.txt'
    In addition: Warning messages:
    1: In engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    2: In engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Execution halted
Flavor: r-oldrel-osx-x86_64