Last updated on 2025-01-19 05:49:16 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 24.75 | 252.57 | 277.32 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 15.48 | 174.14 | 189.62 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3 | 482.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.3 | 428.68 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 27.00 | 248.00 | 275.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 25.06 | 236.09 | 261.15 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 23.85 | 224.34 | 248.19 | ERROR | |
| r-release-macos-arm64 | 1.1.3 | 125.00 | OK | |||
| r-release-macos-x86_64 | 1.1.3 | 214.00 | OK | |||
| r-release-windows-x86_64 | 1.1.3 | 28.00 | 251.00 | 279.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.3 | 133.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.3 | 209.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.3 | 34.00 | 308.00 | 342.00 | OK |
Version: 1.1.3
Check: examples
Result: ERROR
Running examples in ‘plasma-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Contribution-class
> ### Title: Class '"Contribution"'
> ### Aliases: Contribution Contribution-class
> ### [,Contribution,ANY,ANY,ANY-method summary,Contribution-method
> ### image,Contribution-method heat heat,Contribution-method
> ### getCompositeWeights getAllWeights getFinalWeights getTop
> ### pickSignificant
> ### Keywords: classes
>
> ### ** Examples
>
> fls <- try(loadESCAdata())
Warning in load(U, env) :
URL 'http://silicovore.com/data/TCGA-ESCA.RData': Timeout of 60 seconds was reached
Error in load(U, env) :
cannot open the connection to 'http://silicovore.com/data/TCGA-ESCA.RData'
> if (inherits(fls, "try-error")) {
+ stop("Unable to load data from remote server.")
+ }
Error: Unable to load data from remote server.
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘test01-MO.R’ [6s/67s]
Running ‘test02-fitCox.R’ [11s/50s]
Running ‘test03-multiplePLS.R’ [14s/17s]
Running ‘test04-plasma.R’ [13s/17s]
Running ‘test05-interpret.R’ [14s/18s]
Running the tests in ‘tests/test01-MO.R’ failed.
Complete output:
> library(plasma)
> ## check data sets
> fls <- try(loadESCAdata())
Error in load(U, env) :
cannot open the connection to 'http://silicovore.com/data/TCGA-ESCA.RData'
In addition: Warning message:
In load(U, env) :
URL 'http://silicovore.com/data/TCGA-ESCA.RData': Timeout of 60 seconds was reached
> if (inherits(fls, "try-error")) {
+ stop("Unable to load data from remote server.")
+ }
Error: Unable to load data from remote server.
Execution halted
Flavor: r-release-linux-x86_64