2023/08/08 minor fixes to bibentry and S3 generic/method consistency 2023/08/02 minor fix to extend flexibility of genoSim 2022/11/03 fixed warnings on "-Wstrict-prototypes" 2022/08/04 revise estVC for two variance components 2022/06/17 accommodate to new R-devel 2022/06/15 revise a piece of code in idcoef to correctly fetch free disk information in a windows system; fix a few typos in domentation 2022/03/08 some changes in function pedRecode 2022/02/07 minor changes in citEntry items 2021/12/07 some minor revisions 2020/02/18 modify dqrls.f and fix potential confusion calling dqrls on some systems 2020/01/31 fix confusion in some labels 2019/11/04 fix warnings from gcc 2019/10/21 replace a few pieces of FORTRAN code 2018/06/10 improve speed by directly calling fortran code for model fitting 2017/12/10 improve speed on 'estVC' in case of one variance component 2017/10/02 modify 'pedRecode' to allow inbred founders 2017/08/15 use 'malloc' to assure successful creation of large vectors 2016/02/01 modify 'pedF8' in examples to produce desired identify coefficients 2015/11/12 remove compilation notes 2014/04/04 fix a small bug 2013/12/09 fix warning on '.First.lib()' 2012/11/06 add functions qtl2rel and rel2qtl for converting data between QTLRel and R/qtl formats. These two functions are provided by Karl Broman, author of R/qtl. 2012/10/31 copy 'ks.c' from 'stats' in R-2.15.1 to avoid a harsh warning in R CMD CHECK when functions pkolmogorov2x and psmirnov2x are called from 'stat' by '.C'; filled in a missing sex value in pedF8 in the miscEx example data. 2012/07/24 fix a bug in fitting interactive covariates in the case of additive allelic effects, plus some other minor changes. 2011/09/30 allow user to interrupt of 'cic' in addition to other conveniences. 2011/07/21 scanOne is extended to multiple-allelic additive models. 2011/07/10 add a tutorial in doc and more comments in examples. 2011/06/27 remove error messages on certain platforms; add function 'ibs'. 2011/05/18 add to genMatrix: estimate genetic matrices from genotypic data; add to scanOne and scanTwo: allow numerical genotype coding. 2011/04/19 add function 'gls'. 2011/04/14 add function 'scanTwo'. 2011/03/22 resolve the problem of 'long long' type on some platforms. 2011/03/16 resolve the problem of fopen64 and fseeko64 to enable installation on macosx and solaris systems. 2011/03/10 replace scanOne with scanOne4p; add functions to calculate identity coefficients from pedigrees; add a function to create matrices that are associated with non-genetic random effects. 2010/11/10 remove "R (>= 2.9.0)".