insect: Informatic Sequence Classification Trees

Provides tools for probabilistic taxon assignment with informatic sequence classification trees. See Wilkinson et al (2018) <doi:10.7287/peerj.preprints.26812v1>.

Version: 1.4.2
Imports: ape (≥ 3.0.0), aphid (≥ 1.3.1), kmer (≥ 1.1.0), openssl, phylogram (≥ 2.0.0), RANN, seqinr, stats, utils, xml2
Suggests: knitr, rmarkdown, testthat
Published: 2021-08-09
Author: Shaun Wilkinson [aut, cre]
Maintainer: Shaun Wilkinson <shaunpwilkinson at gmail.com>
BugReports: https://github.com/shaunpwilkinson/insect/issues/
License: GPL-3
URL: https://github.com/shaunpwilkinson/insect/
NeedsCompilation: no
Citation: insect citation info
Materials: README
CRAN checks: insect results

Documentation:

Reference manual: insect.pdf
Vignettes: Introduction to the insect package

Downloads:

Package source: insect_1.4.2.tar.gz
Windows binaries: r-devel: insect_1.4.2.zip, r-release: insect_1.4.2.zip, r-oldrel: insect_1.4.2.zip
macOS binaries: r-release (arm64): insect_1.4.2.tgz, r-oldrel (arm64): insect_1.4.2.tgz, r-release (x86_64): insect_1.4.2.tgz
Old sources: insect archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=insect to link to this page.