# Constrained Predictors

#### Jenna Reps

#### 2025-02-10

## Constrained Predictors

### How to use the PhenotypeLibrary R package

Here we provide a set of phenotypes that can be used as predictors in prediction models or best practice research.

These phenotypes can be extracted from the PhenotypeLibrary R package. To install the R package run:

    remotes::install_github("ohdsi/PhenotypeLibrary")

To extract the cohort definition for Alcoholism with an id of 1165, just run:

    PhenotypeLibrary::getPlCohortDefinitionSet(1165)

in general you can extract all the cohorts by running:

    phenotypeDefinitions <- PhenotypeLibrary::getPlCohortDefinitionSet(1152:1215)

### The full set of predictor phenotypes

Phenotype Name | Disorder classification | OHDSI Phenotype library ID
--- | --- | ---
Alcoholism | Behavioral | 1165
Smoking | Behavioral | 1166
Anemia | Blood | 1188
Osteoarthritis | Bone | 1184
Osteoporosis | Bone | 1185
Cancer | Cancer | 1215
Atrial fibrillation | Cardiovascular | 1160
Congestive heart failure | Cardiovascular | 1154
Coronary artery disease | Cardiovascular | 1162
Heart valve disorder | Cardiovascular | 1172
Hyperlipidemia | Cardiovascular | 1170
Hypertension | Cardiovascular | 1198
Angina | Cardiovascular | 1159
Skin Ulcer | Debility | 1168
Diabetes type 1 | Endocrine | 1193
Diabetes type 2 | Endocrine | 1194
Hypothyroidism | Endocrine | 1171
Obesity | Endocrine | 1179
Gastroesophageal reflux disease (GERD) | GI | 1178
Gastrointestinal (GI) bleed | GI | 1197
Inflammatory bowel disorder (IBD) | GI/Rheumatology | 1180
Hormonal contraceptives | Gynecologic | 1190
Antibiotics Aminoglycosides | Infection | 1201
Antibiotics Carbapenems | Infection | 1202
Antibiotics Cephalosporins | Infection | 1203
Antibiotics Fluoroquinolones | Infection | 1204
Antibiotics Glycopeptides and lipoglycopeptides | Infection | 1205
Antibiotics Macrolides | Infection | 1206
Antibiotics Monobactams | Infection | 1207
Antibiotics Oxazolidinones | Infection | 1208
Antibiotics Penicillins | Infection | 1209
Antibiotics Polypeptides | Infection | 1210
Antibiotics Rifamycins | Infection | 1211
Antibiotics Sulfonamides | Infection | 1212
Antibiotics Streptogramins | Infection | 1213
Antibiotics Tetracyclines | Infection | 1214
Pneumonia | Infection/Respiratory | 1199
Sepsis | Infection | 1176
Urinary tract infection (UTI) | Infection | 1186
Hepatitis | Liver | 1169
Anxiety | Mood | 1189
Depression (MDD) | Mood | 1161
Psychotic disorder | Mood | 1175
Antiepileptics (pain) | Neurology/Pain | 1183
Seizure | Neurology | 1153
Hemorrhagic stroke | Neurology/Vascular | 1156
Non-hemorrhagic stroke | Neurology/Vascular | 1155
Acetaminophen prescription | Pain/Infection | 1187
Low back pain | Pain | 1173
Neuropathy | Pain/Neurology | 1174
Opioids | Pain | 1182
Acute kidney injury | Kidney | 1163
Chronic kidney disease | Kidney | 1191
Asthma | Respiratory | 1164
Chronic obstructive pulmonary disorder (COPD) | Respiratory | 1192
Dyspnea | Respiratory | 1195
Respiratory failure | Respiratory | 1177
Sleep apnea | Respiratory | 1167
Rheumatoid arthritis | Rheumatology | 1200
Steroids | Rheumatology/Pain/Pulmonary | 1181
Peripheral vascular disease | Vascular | 1157
Aspirin | Vascular | 1158
Deep vein thrombosis (DVT) | Vascular | 1152
Edema | Vascular | 1196