Simulation of Plot Errors and Phenotypes in Plant Breeding Field Trials

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Documentation for package ‘FieldSimR’ version 1.4.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

compsym_asr_input	Simulate genetic values based on a compound symmetry model for GxE interaction - 'AlphaSimR' input parameters
compsym_asr_output	Simulate genetic values based on a compound symmetry model for GxE interaction - Simulation with 'AlphaSimR'
error_df_bivar	Plot errors - Example data frame
field_trial_error	Simulate plot errors in plant breeding field trials
group_cor_mat	Simulate a reduced rank correlation matrix with multiple groups
gv_df_unstr	Genetic values - Example data frame
make_phenotypes	Generate phenotypes - Combine genetic values and plot errors
multi_asr_input	Simulate genetic values based on a multiplicative model for GxE interaction - 'AlphaSimR' input parameters
multi_asr_output	Simulate genetic values based on a multiplicative model for GxE interaction - Simulation with 'AlphaSimR'
plot_effects	Graphics for plot effects
plot_hist	Histogram of values
plot_matrix	Graphics for matrices
qq_plot	Q-Q plot
rand_cor_mat	Simulate a random correlation matrix
rand_diag_mat	Simulate a random diagonal variance matrix
sample_met	Sample environments from a target population
sample_variogram	Sample variogram
skew_diag_mat	Simulate a skewed diagonal variance matrix
struc_cor_mat	Simulate a structured correlation matrix with reduced rank
theoretical_variogram	Theoretical variogram
unstr_asr_input	Simulate genetic values based on an unstructured model for GxE interaction - 'AlphaSimR' input parameters
unstr_asr_output	Simulate genetic values based on an unstructured model for GxE interaction - Simulation with 'AlphaSimR'