Last updated on 2025-08-03 09:49:48 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.12 | 247.84 | 261.96 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.33 | 203.87 | 214.20 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 224.00 | 245.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.83 | 260.48 | 274.31 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 160.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 185.00 | 204.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.414, system: 0.038, elapsed: 1.721 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.877, system: 0.123, elapsed: 11.104 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.185, elapsed: 5.091 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.848, system: 0.384, elapsed: 19.156 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.520, system: 0.035, elapsed: 2.365 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.908, system: 0.071, elapsed: 13.432 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.408 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.156, elapsed: 6.458 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.002, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.954, system: 0.293, elapsed: 23.680 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.031, elapsed: 2.517 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.944, system: 0.065, elapsed: 14.747 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.176, elapsed: 6.300 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.315 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.123, system: 0.209, elapsed: 1.314 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.184, system: 0.513, elapsed: 26.564 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.459, system: 0.034, elapsed: 1.827 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.011, system: 0.075, elapsed: 12.587 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.264 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.674, system: 0.175, elapsed: 5.328 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.224 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.170, system: 0.464, elapsed: 14.017 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.313, system: 0.793, elapsed: 35.150 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.504, system: 0.038, elapsed: 1.701 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.869, system: 0.065, elapsed: 10.855 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.543, system: 0.175, elapsed: 5.882 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.279 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.802, system: 0.313, elapsed: 19.817 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.028, elapsed: 2.192 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.036, system: 0.066, elapsed: 14.664 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.310 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.573, system: 0.172, elapsed: 5.593 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.972, system: 0.304, elapsed: 23.851 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.498, system: 0.030, elapsed: 1.836 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.988, system: 0.068, elapsed: 12.695 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.010, elapsed: 0.262 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.449, system: 0.156, elapsed: 4.669 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.199 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.050, system: 0.205, elapsed: 0.826 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.956, system: 0.507, elapsed: 21.354 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.477, system: 0.028, elapsed: 1.800 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.895, system: 0.058, elapsed: 11.591 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.343 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.569, system: 0.210, elapsed: 5.194 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.007, elapsed: 0.258 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.031, system: 0.563, elapsed: 13.765 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.962, system: 0.908, elapsed: 33.868 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64