Uses of Interface
org.biojavax.bio.phylo.io.nexus.NexusObject

Packages that use NexusObject
org.biojavax.bio.phylo.io.nexus Classes to support the I/O of Nexus files. 
 

Uses of NexusObject in org.biojavax.bio.phylo.io.nexus
 

Subinterfaces of NexusObject in org.biojavax.bio.phylo.io.nexus
 interface NexusBlock
          Represents a Nexus block.
 

Classes in org.biojavax.bio.phylo.io.nexus that implement NexusObject
 class CharactersBlock
          Represents Nexus characters blocks.
 class DataBlock
          Represents Nexus data blocks.
 class DistancesBlock
          Represents Nexus distances blocks.
static class NexusBlock.Abstract
           
 class NexusComment
          Represents a Nexus comment, possibly nested.
 class TaxaBlock
          Represents Nexus taxa blocks.
 class TreesBlock
          Represents Nexus trees blocks.
 

Methods in org.biojavax.bio.phylo.io.nexus with parameters of type NexusObject
 void NexusFile.addObject(NexusObject object)
          Appends an object to the end of the file.
 boolean NexusFile.containsObject(NexusObject object)
          Checks to see if we contain an object.
 void NexusFile.insertObject(NexusObject object, int pos)
          Inserts an object at the given position.
 void NexusFile.removeObject(NexusObject object)
          Removes an object from the file.