Package org.biojava.bio.proteomics

Utilities to aid in performing various physical analysis of proteins.

See:
          Description

Class Summary
Digest This class contains methods for calculating the results of proteolytic digestion of a protein sequence this class is not designed to be thread safe
IsoelectricPointCalc Class that computes isoelectric point for denaturated proteins.
MassCalc MassCalc calculates the mass of peptides which for our purposes are SymbolLists which contain Symbolsfrom the protein Alphabet.
Protease The protease class stores parameters needed by Digest to digest a protein sequence.
ProteaseManager Registry and utility methods for Proteases.
StructureTools Simple access to protein seccondary structure assignments.
 

Package org.biojava.bio.proteomics Description

Utilities to aid in performing various physical analysis of proteins.