org.biojava.bio.seq.io.agave
Class AGAVEViewPropHandler

java.lang.Object
  extended by org.biojava.bio.seq.io.agave.StAXContentHandlerBase
      extended by org.biojava.bio.seq.io.agave.StAXPropertyHandler
          extended by org.biojava.bio.seq.io.agave.AGAVEViewPropHandler
All Implemented Interfaces:
StAXContentHandler

public class AGAVEViewPropHandler
extends StAXPropertyHandler

Moves view attributes into annotation properties.

start --> view_start

end --> view_end

Author:
Hanning Ni Doubletwist Inc, Keith James, Matthew Pocock

Field Summary
static StAXHandlerFactory AGAVE_VIEW_PROP_HANDLER_FACTORY
           
 
Fields inherited from class org.biojava.bio.seq.io.agave.StAXPropertyHandler
featureListener, staxenv
 
Method Summary
 void startElementHandler(String nsURI, String localName, String qName, Attributes attrs)
          Element-specific handler.
 
Methods inherited from class org.biojava.bio.seq.io.agave.StAXPropertyHandler
addHandler, endElement, endElementHandler, getHandlerStackIterator, setHandlerCharacteristics, setProperty, startElement
 
Methods inherited from class org.biojava.bio.seq.io.agave.StAXContentHandlerBase
characters, endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

AGAVE_VIEW_PROP_HANDLER_FACTORY

public static final StAXHandlerFactory AGAVE_VIEW_PROP_HANDLER_FACTORY
Method Detail

startElementHandler

public void startElementHandler(String nsURI,
                                String localName,
                                String qName,
                                Attributes attrs)
                         throws SAXException
Description copied from class: StAXPropertyHandler
Element-specific handler. Subclass this to do something useful!

Overrides:
startElementHandler in class StAXPropertyHandler
Throws:
SAXException